BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB020A08LP1|AL427559
(1024 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1387 1897 0.0
>3x_Contig1387
Length = 7827
Score = 1897 bits (952), Expect = 0.0
Identities = 1000/1015 (98%), Gaps = 5/1015 (0%)
Strand = Plus / Plus
Query: 14 ccagctagctcgcggaatagattttta-cccatattttatgcactggattagtaaaatat 72
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 4709 ccagctagctcgcggaatagatttttaacccatattttatgcactggattagtaaaatat 4768
Query: 73 agamtaggcttgaatttgmaaaaccacgctataaatatgaggttcaccaggatataaaca 132
||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 4769 agactaggcttgaatttgcaaaaccacgctataaatatgaggttcaccaggatataaaca 4828
Query: 133 gcaaaaaacattccaaaacctgcaaaagattgaagttgcaatatcccagmwnwaagtcct 192
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 4829 gcaaaaaacattccaaaacctgcaaaagattgaagttgcaatatcccagcactaagtcct 4888
Query: 193 gctgtcagcattgtagaatcctgtatccgtagtagtttgttgttgttgaaacttccactt 252
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4889 gctgtcagcattgtagaatcctgtatccgtagtagtttgttgttgttgaaacttccactt 4948
Query: 253 ttggaagactttaggtcggtgaagcgataactcattttccaatgctgttatctcgtagtt 312
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4949 ttggaagactttaggtcggtgaagcgataactcattttccaatgctgttatctcgtagtt 5008
Query: 313 atgattgcnattggttgcaataagccaagactagaataavagtgatttattatgataaat 372
|||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 5009 atgattgcaattggttgcaataagccaagactagaataaaagtgatttattatgataaat 5068
Query: 373 gcagcacttaaggatcaatcgaatcgcagattgaaaagctctgtttctaacggtggttct 432
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5069 gcagcacttaaggatcaatcgaatcgcagattgaaaagctctgtttctaacggtggttct 5128
Query: 433 attcatttaattgaagatggagatctgttattgtcggtttgatgctgatgtaattgttac 492
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5129 attcatttaattgaagatggagatctgttattgtcggtttgatgctgatgtaattgttac 5188
Query: 493 ccgccttaaagagtcgaaccttttctttcacgaaacttgagaaacgtttgacaaactcat 552
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5189 ccgccttaaagagtcgaaccttttctttcacgaaacttgagaaacgtttgacaaactcat 5248
Query: 553 cgcagctcatcgcatcaaccatatctacgttggcagttggtgtaactaggtattgttcac 612
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5249 cgcagctcatcgcatcaaccatatctacgttggcagttggtgtaactaggtattgttcac 5308
Query: 613 cagctaatcaactataactttcattgttcaataaaacatctttgttcganatatctgcgt 672
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 5309 cagctaatcaactataactttcattgttcaataaaacatctttgttcgaaatatctgcgt 5368
Query: 673 ttacttgatacgataaagagggaagatgtccacggaattagaagaattagtgtcattttt 732
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5369 ttacttgatacgataaagagggaagatgtccacggaattagaagaattagtgtcattttt 5428
Query: 733 gcattcagaccagcctgccgtcagacagattgctcttgataatctggttggcttctcaac 792
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5429 gcattcagaccagcctgccgtcagacagattgctcttgataatctggttggcttctcaac 5488
Query: 793 tggagcaagtgctgtcattttcaaatgtaataattacaaagctatagaggatctaaaagt 852
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5489 tggagcaagtgctgtcattttcaaatgtaataattacaaagctatagaggatctaaaagt 5548
Query: 853 tctagctaaagataagtcaaaagttatcgttcaacaatccactacgattttagcgaattt 912
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5549 tctagctaaagataagtcaaaagttatcgttcaacaatccactacgattttagcgaattt 5608
Query: 913 atgtgatgatgttactatgagaaagttgatcgtcaaggatactgaattcctacagtactt 972
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5609 atgtgatgatgttactatgagaaagttgatcgtcaaggatactgaattcctacagtactt 5668
Query: 973 atcgtgg-aaatctgtga-ttagctaacgc-artgcgggatatcatgtgtatttt 1024
||||||| |||||||||| ||||||||||| | ||| ||||||||||||||||||
Sbjct: 5669 atcgtggaaaatctgtgatttagctaacgcaagtgc-ggatatcatgtgtatttt 5722
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7647
Number of Sequences: 1807
Number of extensions: 7647
Number of successful extensions: 63
Number of sequences better than 1.0e-20: 1
length of query: 1024
length of database: 10,358,551
effective HSP length: 16
effective length of query: 1008
effective length of database: 10,329,639
effective search space: 10412276112
effective search space used: 10412276112
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.1 bits)